Feltus, F. Alex: search on Z-Library

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1

Identifying Temporally Regulated Root Nodulation Biomarkers Using Time Series Gene Co-Expression Network Analysis

Poehlman, William L., Schnabel, Elise L., Chavan, Suchitra A., Frugoli, Julia A., Feltus, Frank Alex

Journal:

Frontiers in Plant Science

Year:

2019

Language:

english

File:

PDF, 2.27 MB

english, 2019

2

Negotiated Sharing of Pandemic Data, Models, and Resources

CutcherâGershenfeld, Joel, Baker, Karen S., Berente, Nicholas, Berkman, Paul Arthur, Canavan, Pat, Feltus, F. Alex, Garmulewicz, Alysia, Hutchins, Ron, King, John Leslie, Kirkpatrick, Christine, Len

Journal:

Negotiation Journal

Year:

2020

File:

PDF, 505 KB

2020

3

Quantitative models of hydrolysis conversion efficiency and biomass crystallinity index for plant breeding

Vandenbrink, Joshua P., Hilten, Roger N., Das, K.C., Paterson, Andrew H., Alex Feltus, Frank, Lübberstedt, T.

Journal:

Year:

2013

Language:

english

File:

PDF, 475 KB

english, 2013

4

Systems genetics: A paradigm to improve discovery of candidate genes and mechanisms underlying complex traits

Feltus, F. Alex

Journal:

Year:

2014

Language:

english

File:

PDF, 649 KB

english, 2014

5

Autism risk genes are evolutionarily ancient and maintain a unique feature landscape that echoes their function

Casanova, Emily L., Switala, Andrew E., Dandamudi, Srini, Hickman, Allison R., Vandenbrink, Joshua, Sharp, Julia L., Feltus, Frank Alex, Casanova, Manuel F.

Journal:

Autism Research

Year:

2019

Language:

english

File:

PDF, 700 KB

english, 2019

6

Chromosomal location and gene paucity of the male specific region on papaya Y chromosome

Qingyi Yu, Shaobin Hou, Roman Hobza, F. Alex Feltus, Xiue Wang, Weiwei Jin, Rachel L. Skelton, Andrea Blas, Cornelia Lemke, Jimmy H. Saw, Paul H. Moore, Maqsudul Alam, Jiming Jiang, Andrew H. Paterson

Journal:

Molecular Genetics and Genomics

Year:

2007

Language:

english

File:

PDF, 448 KB

english, 2007

7

[ACM Press the Practice and Experience in Advanced Research Computing - Chicago, IL, USA (2019.07.28-2019.08.01)] Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning) - PEARC '19 - Integrity Protection for Scientific Workflow Data

Rynge, Mats, Poehlman, William L., Feltus, F. Alex, Vahi, Karan, Deelman, Ewa, Mandal, Anirban, Baldin, Ilya, Bhide, Omkar, Heiland, Randy, Welch, Von, Hill, Raquel

Year:

2019

Language:

english

File:

PDF, 1.87 MB

english, 2019

8

Construction of pseudomolecule sequences of Brassica rapa ssp. pekinensis inbred line CT001 and analysis of spontaneous mutations derived via sexual propagation

Park, Jee-Soo, Park, Ji-Hyun, Park, Young-Doo, Feltus, F. Alex

Journal:

Year:

2019

Language:

english

File:

PDF, 1.17 MB

english, 2019

9

[IEEE 2019 IEEE/ACM 5th International Workshop on Data Analysis and Reduction for Big Scientific Data (DRBSD-5) - Denver, CO, USA (2019.11.17-2019.11.17)] 2019 IEEE/ACM 5th International Workshop on Data Analysis and Reduction for Big Scientific Data (DRBSD-5) - Exploring Lossy Compression of Gene Expression Matrices

McKnight, Coleman B., Poulos, Alexandra L., Bender, M. Reed, Calhoun, Jon C., Feltus, F. Alex

Year:

2019

File:

PDF, 234 KB

2019

10

Low X/Y divergence in four pairs of papaya sex-linked genes

Qingyi Yu, Shaobin Hou, F. Alex Feltus, Meghan R. Jones, Jan E. Murray, Olivia Veatch, Cornelia Lemke, Jimmy H. Saw, Richard C. Moore, Jyothi Thimmapuram, Lei Liu, Paul H. Moore, Maqsudul Alam, Jiming

Journal:

The Plant Journal

Year:

2008

Language:

english

File:

PDF, 333 KB

english, 2008

11

A Systems-Genetics Approach and Data Mining Tool to Assist in the Discovery of Genes Underlying Complex Traits in Oryza sativa

Ficklin, Stephen P., Feltus, Frank Alex, Zhang, Jinfa

Journal:

Year:

2013

Language:

english

File:

PDF, 3.86 MB

english, 2013

12

Moving Just Enough Deep Sequencing Data to Get the Job Done

Mills, Nicholas, Bensman, Ethan M, Poehlman, William L, Ligon, Walter B, Feltus, F Alex

Journal:

Bioinformatics and Biology Insights

Year:

2019

Language:

english

File:

PDF, 449 KB

english, 2019

13

Gene Coexpression Network Alignment and Conservation of Gene Modules between Two Grass Species: Maize and Rice

Stephen P. Ficklin and F. Alex Feltus

Journal:

PLANT PHYSIOLOGY

Year:

2011

Language:

english

File:

PDF, 2.60 MB

english, 2011

14

Widespread Genotype-Phenotype Correlations in Intellectual Disability

Casanova, Emily L., Gerstner, Zachary, Sharp, Julia L., Casanova, Manuel F., Feltus, Frank Alex

Journal:

Frontiers in Psychiatry

Year:

2018

Language:

english

File:

PDF, 2.47 MB

english, 2018

15

Tissue specific analysis of bioconversion traits in the bioenergy grass Sorghum bicolor

Vandenbrink, Joshua P., Hammonds, Ryan E., Hilten, Roger N., Das, K.C., Henson, J. Michael, Paterson, Andrew H., Feltus, F. Alex

Journal:

Industrial Crops and Products

Year:

2013

Language:

english

File:

PDF, 1.49 MB

english, 2013

16

Construction of pseudomolecule sequences of Brassica rapa ssp. pekinensis inbred line CT001 and analysis of spontaneous mutations derived via sexual propagation

Park, Jee-Soo, Park, Ji-Hyun, Park, Young-Doo, Feltus, F. Alex

Journal:

Year:

2019

File:

PDF, 1.17 MB

2019

17

Stat5-Mediated Regulation of the Human Type II 3β-Hydroxysteroid Dehydrogenase/Δ 5 -Δ 4 Isomerase Gene: Activation by Prolactin

Feltus, F. Alex, Groner, Bernd, Melner, Michael H.

Journal:

Molecular Endocrinology

Year:

1999

Language:

english

File:

PDF, 483 KB

english, 1999

18

Modes of Gene Duplication Contribute Differently to Genetic Novelty and Redundancy, but Show Parallels across Divergent Angiosperms

Wang, Yupeng, Wang, Xiyin, Tang, Haibao, Tan, Xu, Ficklin, Stephen P., Feltus, F. Alex, Paterson, Andrew H., Proulx, Stephen R.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.17 MB

english, 2011

19

Novel nuclear intron-spanning primers for Arecaceae evolutionary biology

CHRISTINE D. BACON, F. ALEX FELTUS, ANDREW H. PATERSON, C. DONOVAN BAILEY

Journal:

Molecular Ecology Resources

Year:

2008

Language:

english

File:

PDF, 63 KB

english, 2008

20

A comparative assessment of the utility of PCR-based marker systems in pearl millet

Mahendar Thudi, Senapathi Senthilvel, Andrew Bottley, C. Tom Hash, Arjula R. Reddy, Alex F. Feltus, Andrew H. Paterson, David A. Hoisington, Rajeev K. Varshney

Journal:

Year:

2010

Language:

english

File:

PDF, 267 KB

english, 2010

21

Bioenergy grass feedstock: current options and prospects for trait improvement using emerging genetic, genomic, and systems biology toolkits

Frank Alex Feltus, Joshua P Vandenbrink

Journal:

Biotechnology for Biofuels

Year:

2012

Language:

english

File:

PDF, 373 KB

english, 2012

22

Conserved Non-Coding Sequences are Associated with Rates of mRNA Decay in Arabidopsis

Spangler, Jacob B., Feltus, Frank Alex

Journal:

Frontiers in Plant Science

Year:

2013

Language:

english

File:

PDF, 1.01 MB

english, 2013

23

Identification of bioconversion quantitative trait loci in the interspecific crossSorghum bicolor

Vandenbrink, Joshua P., Goff, Valorie, Jin, Huizhe, Kong, Wenqian, Paterson, Andrew H., Alex Feltus, F.

Journal:

Theoretical and Applied Genetics

Year:

2013

Language:

english

File:

PDF, 517 KB

english, 2013

24

[IEEE 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Hong Kong, China (2010.12.18-2010.12.21)] 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - A non-parameter Ising model for network-based identification of differentially expressed genes in recurrent breast cancer patients

Li, Xumeng, Feltus, F. Alex, Sun, Xiaoqian, Wang, Zijun, Luo, Feng

Year:

2010

Language:

english

File:

PDF, 445 KB

english, 2010

25

Epidermal Growth Factor Increases Cortisol Production and Type II 3β-Hydroxysteroid Dehydrogenase/Δ 5 -Δ 4 -Isomerase Expression in Human Adrenocortical Carcinoma Cells: Evidence for a Stat5-Dependent Mechanism

Feltus, F. Alex, Kovacs, William J., Nicholson, Wendell, Silva, Corrine M., Nagdas, Subir K., Ducharme, Nicole A., Melner, Michael H.

Journal:

Year:

2003

Language:

english

File:

PDF, 257 KB

english, 2003

26

The first genome-level transcriptome of the wood-degrading fungusPhanerochaete chrysosporiumgrown on red oak

Shin Sato, F. Alex Feltus, Prashanti Iyer, Ming Tien

Journal:

Current Genetics

Year:

2009

Language:

english

File:

PDF, 565 KB

english, 2009

27

Glucocorticoids enhance activation of the human type II 3β-hydroxysteroid dehydrogenase/Δ5–Δ4 isomerase gene

F.Alex Feltus, Stephanie Cote, Jacques Simard, Sebastien Gingras, William J. Kovacs, Wendell E. Nicholson, Barbara J. Clark, Michael H. Melner

Journal:

The Journal of Steroid Biochemistry and Molecular Biology

Year:

2002

Language:

english

File:

PDF, 288 KB

english, 2002

28

RNAseq Analysis of the Response of Arabidopsis thaliana to Fractional Gravity Under Blue-Light Stimulation During Spaceflight

Herranz, Raúl, Vandenbrink, Joshua P., Villacampa, Alicia, Manzano, Aránzazu, Poehlman, William L., Feltus, Frank Alex, Kiss, John Z., Medina, Francisco Javier

Journal:

Frontiers in Plant Science

Year:

2019

Language:

english

File:

PDF, 3.04 MB

english, 2019

29

How âsimpleâ methodological decisions affect interpretation of population structure based on reduced representation library DNA sequencing: A case study using the lake whitefish

Graham, Carly F., Boreham, Douglas R., Manzon, Richard G., Stott, Wendylee, Wilson, Joanna Y., Somers, Christopher M., Feltus, F. Alex

Journal:

Year:

2020

File:

PDF, 5.07 MB

2020

30

Paracrine Regulation of Matrix Metalloproteinase Expression in the Normal Human Endometrium

Osteen, Kevin G., Keller, Nancy R., Feltus, F. Alex, Melner, Michael H.

Journal:

Gynecologic and Obstetric Investigation

Year:

1999

Language:

english

File:

PDF, 491 KB

english, 1999

31

The Association of Multiple Interacting Genes with Specific Phenotypes in Rice Using Gene Coexpression Networks

Stephen P. Ficklin, Feng Luo and F. Alex Feltus

Journal:

PLANT PHYSIOLOGY

Year:

2010

Language:

english

File:

PDF, 2.57 MB

english, 2010

32

Editorial: AutoImmune Premature Ovarian Failure—Endocrine Aspects of a T Cell Disease 1

Melner, Michael H., Feltus, F. Alex

Journal:

Year:

1999

Language:

english

File:

PDF, 85 KB

english, 1999

33

RNA Expression Profiling Reveals Differentially Regulated Growth Factor and Receptor Expression in Redirected Cancer Cells

Schmucker, Hannah S., Park, Jang Pyo, Coissieux, Marie-May, Bentires-Alj, Mohamed, Feltus, F. Alex, Booth, Brian W.

Journal:

Stem Cells and Development

Year:

2017

Language:

english

File:

PDF, 482 KB

english, 2017

34

Cancer cell redirection biomarker discovery using a mutual information approach

Roche, Kimberly, Feltus, F. Alex, Park, Jang Pyo, Coissieux, Marie-May, Chang, Chenyan, Chan, Vera B. S., Bentires-Alj, Mohamed, Booth, Brian W., Oshima, Robert

Journal:

Year:

2017

Language:

english

File:

PDF, 5.30 MB

english, 2017

35

Utilizing multiplex fluor LAMPs to illuminate multiple gene expressions in situ

Podushkina, Diona, West, Nick W., Golenberg, Edward M., Feltus, F. Alex

Journal:

Year:

2019

Language:

english

File:

PDF, 3.04 MB

english, 2019

36

De novo sequence assembly requires bioinformatic checking of chimeric sequences

Arroyo MÃ¼hr, Laila Sara, Lagheden, Camilla, Hassan, Sadaf Sakina, Kleppe, Sara Nordqvist, Hultin, Emilie, Dillner, Joakim, Feltus, F. Alex

Journal:

Year:

2020

File:

PDF, 659 KB

2020

37

Exploration into biomarker potential of region-specific brain gene co-expression networks

Hang, Yuqing, Aburidi, Mohammed, Husain, Benafsh, Hickman, Allison R., Poehlman, William L., Feltus, F. Alex

Journal:

Scientific Reports

Year:

2020

File:

PDF, 4.06 MB

2020

38

Surveillance of panicle positions by unmanned aerial vehicle to reveal morphological features of rice

Ogawa, Daisuke, Sakamoto, Toshihiro, Tsunematsu, Hiroshi, Yamamoto, Toshio, Kanno, Noriko, Nonoue, Yasunori, Yonemaru, Jun-ichi, Feltus, F. Alex

Journal:

Year:

2019

Language:

english

File:

PDF, 2.60 MB

english, 2019

39

Assessing pooled BAC and whole genome shotgun strategies for assembly of complex genomes

Niina Haiminen, F Alex Feltus, Laxmi Parida

Journal:

Year:

2011

Language:

english

File:

PDF, 2.86 MB

english, 2011

40

Evidence of function for conserved noncoding sequences in Arabidopsis thaliana

Jacob B. Spangler, Sabarinath Subramaniam, Michael Freeling, F. Alex Feltus

Journal:

New Phytologist

Year:

2012

Language:

english

File:

PDF, 525 KB

english, 2012

41

Maximizing capture of gene co-expression relationships through pre-clustering of input expression samples: anArabidopsiscase study

F Alex Feltus, Stephen P Ficklin, Scott M Gibson, Melissa C Smith

Journal:

BMC Systems Biology

Year:

2013

Language:

english

File:

PDF, 917 KB

english, 2013

42

Tripal and Galaxy: supporting reproducible scientific workflows for community biological databases

Spoor, Shawna, Wytko, Connor, Soto, Brian, Chen, Ming, Almsaeed, Abdullah, Condon, Bradford, Herndon, Nic, Hough, Heidi, Jung, Sook, Staton, Meg, Wegrzyn, Jill, Main, Dorrie, Feltus, F Alex, Ficklin,

Journal:

Year:

2020

File:

PDF, 837 KB

2020

43

DNA motifs associated with aberrant CpG island methylation

F. Alex Feltus, Eva K. Lee, Joseph F. Costello, Christoph Plass, Paula M. Vertino

Journal:

Year:

2006

Language:

english

File:

PDF, 453 KB

english, 2006

44

ASorghum bicolorexpression atlas reveals dynamic genotype-specific expression profiles for vegetative tissues of grain, sweet and bioenergy sorghums

Shakoor, Nadia, Nair, Ramesh, Crasta, Oswald, Morris, Geoffrey, Feltus, Alex, Kresovich, Stephen

Journal:

BMC Plant Biology

Year:

2014

Language:

english

File:

PDF, 1.68 MB

english, 2014

45

Real-time tracking of Tomato brown rugose fruit virus (ToBRFV) outbreaks in the Netherlands using Nextstrain

van de Vossenberg, Bart T. L. H., Visser, Michael, Bruinsma, Maaike, Koenraadt, Harrie M. S., Westenberg, Marcel, Botermans, Marleen, Feltus, F. Alex

Journal:

Year:

2020

File:

PDF, 1.58 MB

2020

46

[ACM Press the 5th ACM Conference - Boston, Massachusetts (2018.09.21-2018.09.23)] Proceedings of the 5th ACM Conference on Information-Centric Networking - ICN '18 - NDN-SCI for managing large scale genomics data

Shannigrahi, Susmit, Fan, Chengyu, Papadopoulos, Christos, Feltus, Alex

Year:

2018

Language:

english

File:

PDF, 450 KB

english, 2018

47

Identification and mapping of conserved ortholog set (COS) II sequences of cacao and their conversion to SNP markers for marker-assisted selection inTheobroma cacaoand comparative genomics studies

David N. Kuhn, Don Livingstone, Dorrie Main, Ping Zheng, Chris Saski, F. Alex Feltus, Keithanne Mockaitis, Andrew D. Farmer, Gregory D. May, Raymond J. Schnell, Juan C. Motamayor

Journal:

Tree Genetics & Genomes

Year:

2012

Language:

english

File:

PDF, 457 KB

english, 2012

48

Molecular Biology of the 3β-Hydroxysteroid Dehydrogenase/Δ 5 -Δ 4 Isomerase Gene Family

Simard, Jacques, Ricketts, Marie-Louise, Gingras, Sébastien, Soucy, Penny, Feltus, F. Alex, Melner, Michael H.

Journal:

Endocrine Reviews

Year:

2005

Language:

english

File:

PDF, 1.96 MB

english, 2005

49

Maximizing the performance of scientific data transfer by optimizing the interface between parallel file systems and advanced research networks

Mills, Nicholas, Feltus, F. Alex, Ligon III, Walter B.

Journal:

Future Generation Computer Systems

Year:

2017

Language:

english

File:

PDF, 881 KB

english, 2017

50

Linking Binary Gene Relationships to Drivers of Renal Cell Carcinoma Reveals Convergent Function in Alternate Tumor Progression Paths

Poehlman, William L., Hsieh, James J., Feltus, F. Alex

Journal:

Scientific Reports

Year:

2019

File:

PDF, 1.32 MB

2019

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